Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 FEM1AP1-201ENST00000431297 1995 ntBASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 AC104564.3-201ENST00000582367 638 ntBASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.95■□□□□ 0.62
TRDV1A0A1B0GX56 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 OXCT2P1-201ENST00000447263 1535 ntBASIC18.94■□□□□ 0.62
TRDV1A0A1B0GX56 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 KRT18P60-201ENST00000312876 1297 ntBASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRDV1A0A1B0GX56 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 AC005703.6-201ENST00000623265 1329 ntBASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
TRDV1A0A1B0GX56 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRDV1A0A1B0GX56 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 AC026471.6-201ENST00000622954 1905 ntBASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.9■□□□□ 0.62
TRDV1A0A1B0GX56 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.89■□□□□ 0.62
TRDV1A0A1B0GX56 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRDV1A0A1B0GX56 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms