Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC006015.1-201ENST00000429970 570 ntBASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 AL034346.1-201ENST00000568244 1277 ntBASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 KRT87P-202ENST00000534226 1464 ntBASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPVL3A0A0U1RRI6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPVL3A0A0U1RRI6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.46■□□□□ 0.39
CENPVL3A0A0U1RRI6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CENPVL3A0A0U1RRI6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 ESRRAP2-201ENST00000418437 1549 ntBASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CENPVL3A0A0U1RRI6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 AC139530.1-201ENST00000575312 1977 ntBASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 AC104187.1-201ENST00000607510 612 ntBASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPVL3A0A0U1RRI6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms