Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-9A0A0J9YWB2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-9A0A0J9YWB2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-9A0A0J9YWB2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV7-9A0A0J9YWB2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-9A0A0J9YWB2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-9A0A0J9YWB2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-9A0A0J9YWB2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 FAM99A-202ENST00000538190 1989 ntBASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 UNC93B8-201ENST00000511903 705 ntBASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-9A0A0J9YWB2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 AL451085.2-201ENST00000605085 799 ntBASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 AC087239.1-201ENST00000622671 572 ntBASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 AC007375.3-201ENST00000600936 2314 ntBASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 OR2I1P-207ENST00000453522 948 ntBASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 AL356740.2-201ENST00000601559 647 ntBASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-9A0A0J9YWB2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRBV7-9A0A0J9YWB2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 SLC25A24-204ENST00000569674 2357 ntBASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 KRT16P3-201ENST00000439127 1283 ntBASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 pRNA.6-201ENST00000610482 90 ntBASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 pRNA.5-201ENST00000612139 90 ntBASIC16.01■□□□□ 0.15
TRBV7-9A0A0J9YWB2 pRNA.11-201ENST00000618423 90 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms