Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV24A0A0B4J272 AC244015.2-201ENST00000616358 1861 ntBASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 SLC47A1P1-202ENST00000449666 945 ntBASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 AC026471.6-201ENST00000622954 1905 ntBASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 OXCT2P1-201ENST00000447263 1535 ntBASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV24A0A0B4J272 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 AL136116.3-201ENST00000402907 1138 ntBASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV24A0A0B4J272 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV24A0A0B4J272 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 AP005435.1-201ENST00000529293 1178 ntBASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRAV24A0A0B4J272 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV24A0A0B4J272 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRAV24A0A0B4J272 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.02■□□□□ 0.47
TRAV24A0A0B4J272 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV24A0A0B4J272 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV24A0A0B4J272 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV24A0A0B4J272 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV24A0A0B4J272 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.02■□□□□ 0.47
TRAV24A0A0B4J272 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV24A0A0B4J272 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms