Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 NEFL-201ENST00000610854 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 PRICKLE1-215ENST00000640055 3778 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC037459.3-201ENST00000521025 2750 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC053503.3-201ENST00000448375 114 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AL354676.1-201ENST00000458047 368 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 RN7SL87P-201ENST00000497657 288 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 OR13C2-201ENST00000542196 957 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 ZNF667-AS1-203ENST00000586822 468 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AZU1P1-201ENST00000603479 385 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC009533.1-201ENST00000539757 3158 ntBASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 LINC01429-201ENST00000438154 2326 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 AC007906.2-202ENST00000619363 1687 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NPIPA3F8WFD2 SV2C-201ENST00000322285 3010 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 COQ10A-203ENST00000546544 1369 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 NRXN3-218ENST00000635466 5254 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 KLRK1-201ENST00000240618 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 GSTM5-201ENST00000256593 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AC087741.1-201ENST00000570309 4399 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 LRRC37A7P-201ENST00000583900 2759 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 INO80C-203ENST00000441607 904 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 RN7SL454P-201ENST00000492744 243 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 KRT19P3-201ENST00000507547 828 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AP001922.3-201ENST00000524768 842 ntTSL 3 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 RAD52-212ENST00000541619 560 ntTSL 4 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AC116553.1-201ENST00000561752 397 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AC245884.9-201ENST00000596631 483 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 pRNA.4-201ENST00000620973 89 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AC093323.3-201ENST00000632627 949 ntBASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 ZNF805-202ENST00000414468 1884 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NPIPA3F8WFD2 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 MOCS1P1-201ENST00000564020 1612 ntBASIC11.02□□□□□ -0.64
NPIPA3F8WFD2 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms