Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC12.66□□□□□ -0.38
SLC1A1P43005 BNIP3P20-201ENST00000604827 578 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 AC022001.3-201ENST00000606330 596 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 AL139339.2-201ENST00000608063 657 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 AC090093.1-201ENST00000611315 271 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 PRR5L-216ENST00000530639 2291 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC12.65□□□□□ -0.38
SLC1A1P43005 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 AC087741.1-201ENST00000570309 4399 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 ADH7-204ENST00000476959 1325 ntTSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 MYCNOS-202ENST00000641263 1313 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 FRG2DP-203ENST00000569028 1570 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SLC1A1P43005 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SLC1A1P43005 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 EDNRA-202ENST00000358556 3823 ntTSL 5 BASIC12.65□□□□□ -0.38
SLC1A1P43005 RPL36AP29-201ENST00000415878 321 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 AL356417.2-201ENST00000419064 395 ntTSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 CYP4F60P-201ENST00000439449 549 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 AC109779.1-202ENST00000439810 579 ntTSL 4 BASIC12.65□□□□□ -0.38
SLC1A1P43005 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC12.65□□□□□ -0.38
SLC1A1P43005 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC12.65□□□□□ -0.38
SLC1A1P43005 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC12.65□□□□□ -0.38
SLC1A1P43005 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC12.65□□□□□ -0.38
SLC1A1P43005 MIR4254-201ENST00000581063 76 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 AL589843.2-202ENST00000602289 740 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC12.65□□□□□ -0.38
SLC1A1P43005 AC005740.4-201ENST00000607378 957 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 AC009779.7-201ENST00000609031 469 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 BX322562.1-201ENST00000617004 561 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 AL161669.3-201ENST00000618272 777 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 Metazoa_SRP.95-201ENST00000619648 282 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.65□□□□□ -0.38
SLC1A1P43005 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SLC1A1P43005 DGKA-201ENST00000331886 2909 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SLC1A1P43005 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 DPT-201ENST00000367817 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 AC023824.5-201ENST00000564059 1766 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 FYN-201ENST00000229471 2009 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SLC1A1P43005 RGL4-201ENST00000290691 2885 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 CATSPER1-201ENST00000312106 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 AL662907.1-201ENST00000622988 1360 ntBASIC12.65□□□□□ -0.38
SLC1A1P43005 PARPBP-210ENST00000541394 2452 ntTSL 2 BASIC12.65□□□□□ -0.38
SLC1A1P43005 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 PAX5-205ENST00000377853 1487 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SLC1A1P43005 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
SLC1A1P43005 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SLC1A1P43005 UNC93A-202ENST00000366829 1810 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SLC1A1P43005 SETMAR-201ENST00000358065 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 CLP1-205ENST00000533682 2435 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 USP8-219ENST00000625664 1568 ntTSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 FCGR1A-201ENST00000369168 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 ITGA11-201ENST00000315757 3955 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 SYN3-202ENST00000358763 3126 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 KLHDC4-205ENST00000446344 4444 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 TMEM18-202ENST00000355654 2376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC12.64□□□□□ -0.39
SLC1A1P43005 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 AC055813.1-201ENST00000587110 2123 ntBASIC12.64□□□□□ -0.39
SLC1A1P43005 MICU1-211ENST00000635239 2215 ntTSL 5 BASIC12.64□□□□□ -0.39
SLC1A1P43005 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SLC1A1P43005 CATSPERG-202ENST00000409235 3746 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms