Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MGST3-204ENST00000367888 778 ntTSL 3 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 KRT41P-201ENST00000393988 1293 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 KANK1P1-201ENST00000400619 1234 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC005587.1-201ENST00000401879 592 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 THAP4-203ENST00000402545 833 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC007322.2-201ENST00000414540 605 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MRPS16P3-201ENST00000415961 374 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC211485.1-201ENST00000417100 1107 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 RPSAP46-201ENST00000428316 882 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 ATP5G1P7-201ENST00000444398 400 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC104819.2-201ENST00000507181 163 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MRPS27-212ENST00000522095 504 ntTSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MIR4296-201ENST00000581038 88 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AL512631.1-201ENST00000604086 840 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC008013.1-201ENST00000612219 629 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 RN7SL238P-201ENST00000613832 290 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 RN7SL106P-201ENST00000618104 290 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 KLHDC4-205ENST00000446344 4444 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 PAK3-206ENST00000425146 2477 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 AC019294.1-202ENST00000566174 2071 ntBASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NPIPA3F8WFD2 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 EIF3LP1-201ENST00000554099 1658 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 ASTN2-203ENST00000341734 1757 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 HADH-210ENST00000626637 1774 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PARPBP-210ENST00000541394 2452 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 MTFR1L-210ENST00000474295 1873 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC005102.1-201ENST00000403118 479 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC009237.11-201ENST00000425635 265 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC018892.1-201ENST00000451098 265 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AL391822.1-201ENST00000452580 562 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PFN1P10-201ENST00000455962 327 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC022483.2-201ENST00000461464 555 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 TSACC-206ENST00000466306 477 ntTSL 3 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 RN7SL186P-201ENST00000466485 297 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 HNRNPA1P24-201ENST00000476029 1046 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 RN7SL386P-201ENST00000485776 297 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 RBP5-202ENST00000542370 564 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 C12orf80-202ENST00000551894 1257 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 ENO1P2-201ENST00000557166 974 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC084262.1-201ENST00000567818 751 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AL353708.1-201ENST00000567904 1257 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 FAM223B-202ENST00000598177 713 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms