Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TGFB1I1O43294 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TGFB1I1O43294 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TGFB1I1O43294 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
TGFB1I1O43294 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
TGFB1I1O43294 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 CEP89-204ENST00000590597 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 ABR-201ENST00000291107 2673 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 IFNA6-201ENST00000259555 704 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 LINC00443-201ENST00000421601 1170 ntTSL 3 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC253536.2-201ENST00000423307 254 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC114495.2-201ENST00000452686 437 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 SNORD10-201ENST00000459579 142 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC068298.1-201ENST00000465165 161 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 RN7SL477P-201ENST00000488440 286 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC009078.2-201ENST00000489723 1254 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 ENO1P2-201ENST00000557166 974 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC105036.3-204ENST00000568707 789 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 FGF11-205ENST00000575398 990 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 MIR4296-201ENST00000581038 88 ntBASIC13.14□□□□□ -0.31
TGFB1I1O43294 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AC010422.2-201ENST00000593554 635 ntTSL 3 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 PAX4-208ENST00000639438 2206 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 ZNRD1ASP-219ENST00000448093 2296 ntTSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 TP53-204ENST00000420246 2653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 TP53-227ENST00000622645 2653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TGFB1I1O43294 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TGFB1I1O43294 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 GPR61-207ENST00000618721 2823 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AL109618.1-201ENST00000434910 1683 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 LINC01686-201ENST00000566297 1376 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AC245297.1-201ENST00000313342 933 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 UFC1-201ENST00000368003 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AL359692.1-201ENST00000451069 265 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 AL513366.1-201ENST00000456427 1248 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 KIAA0930-213ENST00000492273 403 ntTSL 3 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AC120498.5-201ENST00000561757 299 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TGFB1I1O43294 LINC02184-201ENST00000568121 552 ntTSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AC103810.4-201ENST00000578601 257 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AC105105.4-201ENST00000610389 713 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 AC012313.9-201ENST00000619318 633 ntBASIC13.13□□□□□ -0.31
TGFB1I1O43294 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
TGFB1I1O43294 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms