Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HRH3Q9Y5N1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.9■□□□□ 0.78
HRH3Q9Y5N1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 AC012414.1-201ENST00000556676 535 ntBASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HRH3Q9Y5N1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 AC123595.1-201ENST00000440769 1046 ntBASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.88■□□□□ 0.77
HRH3Q9Y5N1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 AC010141.3-201ENST00000456659 717 ntBASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 AC092437.1-201ENST00000624794 1048 ntBASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HRH3Q9Y5N1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HRH3Q9Y5N1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 CCDC92B-201ENST00000575506 885 ntBASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 AL354811.1-201ENST00000610286 706 ntBASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HRH3Q9Y5N1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 AC137767.1-201ENST00000602918 1920 ntBASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms