Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 AL024507.2-201ENST00000606070 2574 ntBASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.56■□□□□ 0.56
MRPS28Q9Y2Q9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPS28Q9Y2Q9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPS28Q9Y2Q9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 AL117332.1-201ENST00000622628 974 ntBASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPS28Q9Y2Q9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPS28Q9Y2Q9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
MRPS28Q9Y2Q9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 AC241377.3-202ENST00000626088 1088 ntBASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 AC241585.3-202ENST00000628937 1088 ntBASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 AC245100.8-202ENST00000629247 1058 ntBASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms