Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1Q9Y2A7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 KRT87P-202ENST00000534226 1464 ntBASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 AC073111.5-205ENST00000641717 521 ntBASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKAP1Q9Y2A7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 AC026185.1-201ENST00000445748 174 ntBASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1Q9Y2A7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 CDCA4P2-201ENST00000441182 718 ntBASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1Q9Y2A7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
NCKAP1Q9Y2A7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NCKAP1Q9Y2A7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1Q9Y2A7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 AC104187.1-201ENST00000607510 612 ntBASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 AC011767.1-201ENST00000617410 1153 ntBASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.63■■□□□ 1.05
NCKAP1Q9Y2A7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 AP004607.7-201ENST00000527152 1677 ntBASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 OR7E47P-201ENST00000546390 1422 ntBASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NCKAP1Q9Y2A7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 HLA-L-209ENST00000420110 1011 ntBASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.61■■□□□ 1.05
NCKAP1Q9Y2A7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms