Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 AL121832.2-201ENST00000610979 668 ntBASIC28.43■■■□□ 2.14
SPG7Q9UQ90 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.43■■■□□ 2.14
SPG7Q9UQ90 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 DUSP8P5-201ENST00000422884 1815 ntBASIC28.42■■■□□ 2.14
SPG7Q9UQ90 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 AC007322.1-201ENST00000426983 750 ntBASIC28.42■■■□□ 2.14
SPG7Q9UQ90 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPG7Q9UQ90 LINC01960-201ENST00000563759 1884 ntBASIC28.42■■■□□ 2.14
SPG7Q9UQ90 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 SERP1-208ENST00000491660 830 ntTSL 2 BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 AC083906.2-201ENST00000511578 360 ntBASIC28.41■■■□□ 2.14
SPG7Q9UQ90 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 MYCNOS-205ENST00000641950 531 ntBASIC28.41■■■□□ 2.14
SPG7Q9UQ90 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPG7Q9UQ90 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SPG7Q9UQ90 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.4■■■□□ 2.14
SPG7Q9UQ90 AC142086.2-201ENST00000569753 217 ntBASIC28.4■■■□□ 2.14
SPG7Q9UQ90 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.4■■■□□ 2.14
SPG7Q9UQ90 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.4■■■□□ 2.14
SPG7Q9UQ90 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SPG7Q9UQ90 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.4■■■□□ 2.14
SPG7Q9UQ90 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 ABHD17AP1-201ENST00000358206 933 ntBASIC28.39■■■□□ 2.14
SPG7Q9UQ90 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 AC005181.1-201ENST00000604782 1256 ntBASIC28.39■■■□□ 2.14
SPG7Q9UQ90 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.39■■■□□ 2.14
SPG7Q9UQ90 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SPG7Q9UQ90 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SPG7Q9UQ90 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPG7Q9UQ90 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SPG7Q9UQ90 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
SPG7Q9UQ90 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.38■■■□□ 2.13
SPG7Q9UQ90 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPG7Q9UQ90 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.38■■■□□ 2.13
SPG7Q9UQ90 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SPG7Q9UQ90 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC28.37■■■□□ 2.13
SPG7Q9UQ90 TSPY6P-201ENST00000448518 926 ntBASIC28.37■■■□□ 2.13
SPG7Q9UQ90 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.37■■■□□ 2.13
SPG7Q9UQ90 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28.37■■■□□ 2.13
SPG7Q9UQ90 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SPG7Q9UQ90 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
SPG7Q9UQ90 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
SPG7Q9UQ90 AP004607.7-201ENST00000527152 1677 ntBASIC28.35■■■□□ 2.13
SPG7Q9UQ90 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPG7Q9UQ90 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.35■■■□□ 2.13
SPG7Q9UQ90 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SPG7Q9UQ90 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SPG7Q9UQ90 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.35■■■□□ 2.13
SPG7Q9UQ90 SLC7A5P2-201ENST00000553010 536 ntBASIC28.35■■■□□ 2.13
SPG7Q9UQ90 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPG7Q9UQ90 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 GUSBP6-202ENST00000438529 1198 ntBASIC28.33■■■□□ 2.13
SPG7Q9UQ90 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 AC010141.2-201ENST00000452426 721 ntBASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms