Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 AL034346.1-201ENST00000568244 1277 ntBASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 AC138907.5-202ENST00000569484 235 ntBASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
SHANK2Q9UPX8 AP006587.3-201ENST00000525742 1516 ntBASIC32.47■■■□□ 2.79
SHANK2Q9UPX8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC32.47■■■□□ 2.79
SHANK2Q9UPX8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SHANK2Q9UPX8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SHANK2Q9UPX8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC32.47■■■□□ 2.79
SHANK2Q9UPX8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC32.47■■■□□ 2.79
SHANK2Q9UPX8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 AL109923.1-201ENST00000618799 583 ntBASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SHANK2Q9UPX8 LINC00526-201ENST00000581067 1875 ntBASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 SLC7A5P2-201ENST00000553010 536 ntBASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC32.45■■■□□ 2.79
SHANK2Q9UPX8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
SHANK2Q9UPX8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 CNN2P6-201ENST00000439038 900 ntBASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SHANK2Q9UPX8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 AP001160.3-201ENST00000601484 763 ntBASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 AC231657.2-201ENST00000624556 255 ntBASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SHANK2Q9UPX8 EEF1DP3-203ENST00000566025 782 ntBASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 AC142086.2-201ENST00000569753 217 ntBASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 AP004607.7-201ENST00000527152 1677 ntBASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 CD99P1-205ENST00000527459 561 ntBASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC32.42■■■□□ 2.78
SHANK2Q9UPX8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC32.41■■■□□ 2.78
SHANK2Q9UPX8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SHANK2Q9UPX8 FXN-202ENST00000396364 980 ntTSL 5 BASIC32.41■■■□□ 2.78
SHANK2Q9UPX8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC32.41■■■□□ 2.78
SHANK2Q9UPX8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SHANK2Q9UPX8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC32.41■■■□□ 2.78
SHANK2Q9UPX8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 OR7E47P-201ENST00000546390 1422 ntBASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC32.4■■■□□ 2.78
SHANK2Q9UPX8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms