Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 TSPY26P-201ENST00000476365 1326 ntBASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGC3Q9UN70 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 SMUG1P1-201ENST00000590640 811 ntBASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 AC005837.3-201ENST00000612163 286 ntBASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC3Q9UN70 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 MIR638-201ENST00000385237 100 ntBASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGC3Q9UN70 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 LINC00565-201ENST00000562710 2331 ntBASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 FAM99A-202ENST00000538190 1989 ntBASIC22.86■■□□□ 1.25
PCDHGC3Q9UN70 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 AC142381.2-201ENST00000566120 298 ntBASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC3Q9UN70 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 AL034346.1-201ENST00000568244 1277 ntBASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC3Q9UN70 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 MIR572-201ENST00000384983 95 ntBASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms