Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 AC087742.1-201ENST00000575880 1738 ntBASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
PCDHB8Q9UN66 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 AP004607.7-201ENST00000527152 1677 ntBASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB8Q9UN66 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB8Q9UN66 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB8Q9UN66 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB8Q9UN66 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB8Q9UN66 AC016769.1-201ENST00000409132 1010 ntBASIC23■■□□□ 1.27
PCDHB8Q9UN66 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB8Q9UN66 DUSP8P5-201ENST00000422884 1815 ntBASIC23■■□□□ 1.27
PCDHB8Q9UN66 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB8Q9UN66 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDHB8Q9UN66 AC055733.4-201ENST00000638462 1354 ntBASIC23■■□□□ 1.27
PCDHB8Q9UN66 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB8Q9UN66 KRT87P-202ENST00000534226 1464 ntBASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 AL034346.1-201ENST00000568244 1277 ntBASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PCDHB8Q9UN66 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 AC137767.1-201ENST00000602918 1920 ntBASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
PCDHB8Q9UN66 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
PCDHB8Q9UN66 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHB8Q9UN66 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms