Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 AC142381.3-201ENST00000568208 1670 ntBASIC16.58■□□□□ 0.25
NOTCH3Q9UM47 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.58■□□□□ 0.25
NOTCH3Q9UM47 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.58■□□□□ 0.25
NOTCH3Q9UM47 AF201337.1-201ENST00000520239 748 ntBASIC16.58■□□□□ 0.25
NOTCH3Q9UM47 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.58■□□□□ 0.25
NOTCH3Q9UM47 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NOTCH3Q9UM47 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 CNN2P6-201ENST00000439038 900 ntBASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 CD99P1-205ENST00000527459 561 ntBASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.58■□□□□ 0.24
NOTCH3Q9UM47 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 AC093827.2-201ENST00000512654 315 ntBASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 DUX4L16-201ENST00000555130 1264 ntBASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.57■□□□□ 0.24
NOTCH3Q9UM47 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NOTCH3Q9UM47 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.55■□□□□ 0.24
NOTCH3Q9UM47 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 AC083906.2-201ENST00000511578 360 ntBASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 AC008687.6-201ENST00000596318 630 ntBASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 TMEM191A-211ENST00000637163 1067 ntBASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH3Q9UM47 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms