Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 AL592293.1-201ENST00000502889 1188 ntBASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 AC087289.5-201ENST00000586076 3175 ntBASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN2Q9UHD9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN2Q9UHD9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBQLN2Q9UHD9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBQLN2Q9UHD9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 AC244015.2-201ENST00000616358 1861 ntBASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBQLN2Q9UHD9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 KRT18P60-201ENST00000312876 1297 ntBASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.13■□□□□ 0.49
UBQLN2Q9UHD9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBQLN2Q9UHD9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
UBQLN2Q9UHD9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms