Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NIPSNAP3AQ9UFN0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.58■□□□□ 0.89
NIPSNAP3AQ9UFN0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NIPSNAP3AQ9UFN0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NIPSNAP3AQ9UFN0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NIPSNAP3AQ9UFN0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 AC244015.2-201ENST00000616358 1861 ntBASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPSNAP3AQ9UFN0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPSNAP3AQ9UFN0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 AC005229.4-201ENST00000610085 2198 ntBASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 C17orf82-201ENST00000623772 1530 ntBASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NIPSNAP3AQ9UFN0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.54■□□□□ 0.88
NIPSNAP3AQ9UFN0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.53■□□□□ 0.88
NIPSNAP3AQ9UFN0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 MIR4787-201ENST00000607364 84 ntBASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 AC010997.5-201ENST00000609182 354 ntBASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPSNAP3AQ9UFN0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
NIPSNAP3AQ9UFN0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NIPSNAP3AQ9UFN0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NIPSNAP3AQ9UFN0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NIPSNAP3AQ9UFN0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms