Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 AL355001.2-201ENST00000620617 1191 ntBASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAP1Q9NZP6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 AC011298.3-201ENST00000615796 283 ntBASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 AC026310.3-201ENST00000625186 2373 ntBASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAP1Q9NZP6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 AP001330.3-201ENST00000520123 633 ntBASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 AF213884.3-201ENST00000563833 479 ntBASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 AL138724.1-201ENST00000606771 1088 ntBASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NPAP1Q9NZP6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 MIR935-201ENST00000401179 91 ntBASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 MIR3181-201ENST00000578512 73 ntBASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPAP1Q9NZP6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAP1Q9NZP6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPAP1Q9NZP6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 MIR939-201ENST00000401314 82 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 pRNA.6-201ENST00000610482 90 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 pRNA.5-201ENST00000612139 90 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 pRNA.11-201ENST00000618423 90 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 pRNA.13-201ENST00000619112 90 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 AL136967.2-201ENST00000623968 743 ntBASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
NPAP1Q9NZP6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAP1Q9NZP6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAP1Q9NZP6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAP1Q9NZP6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms