Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 CCDC92B-201ENST00000575506 885 ntBASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 LINC02228-203ENST00000641970 1355 ntBASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPHK1Q9NYA1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 MIR5787-201ENST00000611784 55 ntBASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPHK1Q9NYA1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPHK1Q9NYA1 AC233723.2-201ENST00000623798 2106 ntBASIC20.83■□□□□ 0.92
SPHK1Q9NYA1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPHK1Q9NYA1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L2-201ENST00000561772 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 TERF1P2-201ENST00000583350 1212 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L6-201ENST00000626483 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L1-201ENST00000627662 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L8-201ENST00000629013 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L3-201ENST00000630187 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L7-201ENST00000630678 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 DUX4L5-201ENST00000630834 1275 ntBASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.82■□□□□ 0.92
SPHK1Q9NYA1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 AP004607.7-201ENST00000527152 1677 ntBASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPHK1Q9NYA1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPHK1Q9NYA1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms