Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.85■□□□□ 0.93
NDE1Q9NXR1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 CA15P2-201ENST00000611168 834 ntBASIC20.84■□□□□ 0.93
NDE1Q9NXR1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDE1Q9NXR1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NDE1Q9NXR1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDE1Q9NXR1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDE1Q9NXR1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDE1Q9NXR1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NDE1Q9NXR1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.83■□□□□ 0.93
NDE1Q9NXR1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
NDE1Q9NXR1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.83■□□□□ 0.92
NDE1Q9NXR1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.83■□□□□ 0.92
NDE1Q9NXR1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDE1Q9NXR1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDE1Q9NXR1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDE1Q9NXR1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 MIR4281-201ENST00000580852 62 ntBASIC20.82■□□□□ 0.92
NDE1Q9NXR1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDE1Q9NXR1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NDE1Q9NXR1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDE1Q9NXR1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.79■□□□□ 0.92
NDE1Q9NXR1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 KRT18P24-201ENST00000344739 1156 ntBASIC20.79■□□□□ 0.92
NDE1Q9NXR1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 THA1P-201ENST00000590384 1145 ntBASIC20.79■□□□□ 0.92
NDE1Q9NXR1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDE1Q9NXR1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms