Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LIN7CQ9NUP9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 SRD5A1P1-201ENST00000442297 786 ntBASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 AC010542.4-201ENST00000563151 1910 ntBASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 FAM99A-202ENST00000538190 1989 ntBASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LIN7CQ9NUP9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 C17orf82-201ENST00000623772 1530 ntBASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.88■□□□□ 0.45
LIN7CQ9NUP9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 AC004687.1-201ENST00000579003 1625 ntBASIC17.87■□□□□ 0.45
LIN7CQ9NUP9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 AL136116.3-201ENST00000402907 1138 ntBASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 MIR4466-201ENST00000606121 54 ntBASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 AC092171.4-201ENST00000609130 632 ntBASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 AC241377.3-202ENST00000626088 1088 ntBASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 AC241585.3-202ENST00000628937 1088 ntBASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 AC245100.8-202ENST00000629247 1058 ntBASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIN7CQ9NUP9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 CA15P2-201ENST00000611168 834 ntBASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LIN7CQ9NUP9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms