Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 IRS3P-201ENST00000223076 1006 ntBASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 ZNRF2P3-201ENST00000424200 374 ntBASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ECHDC1Q9NTX5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.39■■□□□ 1.82
ECHDC1Q9NTX5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ECHDC1Q9NTX5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.39■■□□□ 1.81
ECHDC1Q9NTX5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ECHDC1Q9NTX5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ECHDC1Q9NTX5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.39■■□□□ 1.81
ECHDC1Q9NTX5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ECHDC1Q9NTX5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ECHDC1Q9NTX5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 AC012414.1-201ENST00000556676 535 ntBASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ECHDC1Q9NTX5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.36■■□□□ 1.81
ECHDC1Q9NTX5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ECHDC1Q9NTX5 AP004607.7-201ENST00000527152 1677 ntBASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 AL354811.1-201ENST00000610286 706 ntBASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.34■■□□□ 1.81
ECHDC1Q9NTX5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ECHDC1Q9NTX5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ECHDC1Q9NTX5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms