Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 AC105265.2-201ENST00000467189 838 ntBASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECTIN3Q9NQS3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
NECTIN3Q9NQS3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NECTIN3Q9NQS3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 AL137060.1-201ENST00000618151 2648 ntBASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
NECTIN3Q9NQS3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECTIN3Q9NQS3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 AP005435.1-201ENST00000529293 1178 ntBASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 AL031602.1-201ENST00000633169 911 ntBASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.58■□□□□ 0.89
NECTIN3Q9NQS3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
NECTIN3Q9NQS3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms