Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NRIP3Q9NQ35 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NRIP3Q9NQ35 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NRIP3Q9NQ35 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NRIP3Q9NQ35 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 SRD5A1P1-201ENST00000442297 786 ntBASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 AC092171.4-201ENST00000609130 632 ntBASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 AC068587.7-201ENST00000641602 218 ntBASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.44■□□□□ 0.7
NRIP3Q9NQ35 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 OR2I1P-207ENST00000453522 948 ntBASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.43■□□□□ 0.7
NRIP3Q9NQ35 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 AC026310.3-201ENST00000625186 2373 ntBASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NRIP3Q9NQ35 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 AC244015.2-201ENST00000616358 1861 ntBASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NRIP3Q9NQ35 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NRIP3Q9NQ35 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
NRIP3Q9NQ35 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NRIP3Q9NQ35 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NRIP3Q9NQ35 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NRIP3Q9NQ35 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.39■□□□□ 0.69
NRIP3Q9NQ35 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms