Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.29■■□□□ 1
POPDC3Q9HBV1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.29■■□□□ 1
POPDC3Q9HBV1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
POPDC3Q9HBV1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POPDC3Q9HBV1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.29■■□□□ 1
POPDC3Q9HBV1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.29■■□□□ 1
POPDC3Q9HBV1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POPDC3Q9HBV1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
POPDC3Q9HBV1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
POPDC3Q9HBV1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.29■■□□□ 1
POPDC3Q9HBV1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.29■■□□□ 1
POPDC3Q9HBV1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
POPDC3Q9HBV1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
POPDC3Q9HBV1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
POPDC3Q9HBV1 AC007375.3-201ENST00000600936 2314 ntBASIC21.28■■□□□ 1
POPDC3Q9HBV1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.28■■□□□ 1
POPDC3Q9HBV1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
POPDC3Q9HBV1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.28■■□□□ 1
POPDC3Q9HBV1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.27■■□□□ 1
POPDC3Q9HBV1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.27■■□□□ 1
POPDC3Q9HBV1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
POPDC3Q9HBV1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.27■□□□□ 0.99
POPDC3Q9HBV1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POPDC3Q9HBV1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 AL034346.1-201ENST00000568244 1277 ntBASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
POPDC3Q9HBV1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
POPDC3Q9HBV1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
POPDC3Q9HBV1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 AL136116.3-201ENST00000402907 1138 ntBASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms