Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
UPF2Q9HAU5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 YBX1P4-201ENST00000392794 808 ntBASIC26.43■■□□□ 1.82
UPF2Q9HAU5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC26.43■■□□□ 1.82
UPF2Q9HAU5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 Z98882.1-201ENST00000622160 2253 ntBASIC26.42■■□□□ 1.82
UPF2Q9HAU5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
UPF2Q9HAU5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.41■■□□□ 1.82
UPF2Q9HAU5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC26.4■■□□□ 1.82
UPF2Q9HAU5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.39■■□□□ 1.82
UPF2Q9HAU5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.39■■□□□ 1.82
UPF2Q9HAU5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.39■■□□□ 1.82
UPF2Q9HAU5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
UPF2Q9HAU5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.39■■□□□ 1.82
UPF2Q9HAU5 AC103724.3-201ENST00000564481 992 ntBASIC26.39■■□□□ 1.82
UPF2Q9HAU5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.81
UPF2Q9HAU5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPF2Q9HAU5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 AC103834.1-201ENST00000520383 144 ntBASIC26.37■■□□□ 1.81
UPF2Q9HAU5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.37■■□□□ 1.81
UPF2Q9HAU5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.36■■□□□ 1.81
UPF2Q9HAU5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UPF2Q9HAU5 KRT8P33-201ENST00000508125 1423 ntBASIC26.35■■□□□ 1.81
UPF2Q9HAU5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms