Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.95■□□□□ 0.62
ZCCHC4Q9H5U6 AC009102.2-201ENST00000606772 1639 ntBASIC18.95■□□□□ 0.62
ZCCHC4Q9H5U6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZCCHC4Q9H5U6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZCCHC4Q9H5U6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZCCHC4Q9H5U6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZCCHC4Q9H5U6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZCCHC4Q9H5U6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 Z98882.1-201ENST00000622160 2253 ntBASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZCCHC4Q9H5U6 AC004687.1-201ENST00000579003 1625 ntBASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 FEM1AP4-201ENST00000443167 1987 ntBASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.92■□□□□ 0.62
ZCCHC4Q9H5U6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 MIR4787-201ENST00000607364 84 ntBASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC4Q9H5U6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC4Q9H5U6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZCCHC4Q9H5U6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.89■□□□□ 0.62
ZCCHC4Q9H5U6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 LINC01521-201ENST00000504184 1943 ntBASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 C17orf82-201ENST00000623772 1530 ntBASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
ZCCHC4Q9H5U6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ZCCHC4Q9H5U6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms