Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM4CQ9H3R0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM4CQ9H3R0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
KDM4CQ9H3R0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
KDM4CQ9H3R0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM4CQ9H3R0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 DUX4L4-201ENST00000566884 1269 ntBASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 AL499627.2-201ENST00000606283 725 ntBASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 MIR6821-201ENST00000617625 74 ntBASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 AC073130.3-201ENST00000624389 2278 ntBASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
KDM4CQ9H3R0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
KDM4CQ9H3R0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.39■■□□□ 1.18
KDM4CQ9H3R0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.39■■□□□ 1.18
KDM4CQ9H3R0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.39■■□□□ 1.18
KDM4CQ9H3R0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
KDM4CQ9H3R0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 AC097381.1-201ENST00000429019 1296 ntBASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM4CQ9H3R0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
KDM4CQ9H3R0 AC133637.1-201ENST00000624115 1537 ntBASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 C11orf96-202ENST00000528572 1834 ntBASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 AC126544.1-201ENST00000580842 1059 ntBASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
KDM4CQ9H3R0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KDM4CQ9H3R0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 AC144652.1-201ENST00000609974 1624 ntBASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 FBXW4P1-201ENST00000426721 2239 ntBASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KDM4CQ9H3R0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
KDM4CQ9H3R0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms