Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.35■■□□□ 1.81
RPAP1Q9BWH6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 TPRG1LP1-201ENST00000598702 760 ntBASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP1Q9BWH6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 GUSBP5-202ENST00000510805 1989 ntBASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP1Q9BWH6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RPAP1Q9BWH6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
RPAP1Q9BWH6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
RPAP1Q9BWH6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.33■■□□□ 1.8
RPAP1Q9BWH6 KRT18P61-201ENST00000585825 1298 ntBASIC26.33■■□□□ 1.8
RPAP1Q9BWH6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.33■■□□□ 1.8
RPAP1Q9BWH6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP1Q9BWH6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 AC127496.7-201ENST00000625110 1798 ntBASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 AC068587.7-201ENST00000641602 218 ntBASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP1Q9BWH6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 AC087742.1-201ENST00000575880 1738 ntBASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 ESRRAP2-201ENST00000418437 1549 ntBASIC26.3■■□□□ 1.8
RPAP1Q9BWH6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RPAP1Q9BWH6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP1Q9BWH6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms