Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 tL(CAA)G3tL(CAA)G3 82 nt2.74□□□□□ -1.97
ATG40Q99325 tL(CAA)KtL(CAA)K 82 nt2.74□□□□□ -1.97
ATG40Q99325 tL(CAA)LtL(CAA)L 82 nt2.74□□□□□ -1.97
ATG40Q99325 tL(CAA)MtL(CAA)M 82 nt2.74□□□□□ -1.97
ATG40Q99325 tL(CAA)NtL(CAA)N 82 nt2.74□□□□□ -1.97
ATG40Q99325 PHD1YKL043W 1101 nt2.74□□□□□ -1.97
ATG40Q99325 GCD7YLR291C 1146 nt2.74□□□□□ -1.97
ATG40Q99325 PEX12YMR026C 1200 nt2.74□□□□□ -1.97
ATG40Q99325 SPB4YFL002C 1821 nt2.74□□□□□ -1.97
ATG40Q99325 SSE2YBR169C 2082 nt2.73□□□□□ -1.97
ATG40Q99325 SHQ1YIL104C 1524 nt2.73□□□□□ -1.97
ATG40Q99325 ATG26YLR189C 3597 nt2.73□□□□□ -1.97
ATG40Q99325 YCL075WYCL075W 441 nt2.73□□□□□ -1.97
ATG40Q99325 RPS14AYCR031C 414 nt2.73□□□□□ -1.97
ATG40Q99325 YDL176WYDL176W 2127 nt2.73□□□□□ -1.97
ATG40Q99325 RRP1YDR087C 837 nt2.73□□□□□ -1.97
ATG40Q99325 YLR326WYLR326W 723 nt2.73□□□□□ -1.97
ATG40Q99325 ERD2YBL040C 660 nt2.73□□□□□ -1.97
ATG40Q99325 POC4YPL144W 447 nt2.73□□□□□ -1.97
ATG40Q99325 PWP2YCR057C 2772 nt2.73□□□□□ -1.97
ATG40Q99325 APM1YPL259C 1428 nt2.73□□□□□ -1.97
ATG40Q99325 TGL3YMR313C 1929 nt2.73□□□□□ -1.97
ATG40Q99325 SNT1YCR033W 3681 nt2.73□□□□□ -1.97
ATG40Q99325 RTK1YDL025C 1863 nt2.73□□□□□ -1.97
ATG40Q99325 RSF2YJR127C 4143 nt2.73□□□□□ -1.97
ATG40Q99325 HER2YMR293C 1395 nt2.73□□□□□ -1.97
ATG40Q99325 NFI1YOR156C 2181 nt2.73□□□□□ -1.97
ATG40Q99325 MNR2YKL064W 2910 nt2.72□□□□□ -1.97
ATG40Q99325 DET1YDR051C 1005 nt2.72□□□□□ -1.97
ATG40Q99325 YHI9YHR029C 885 nt2.72□□□□□ -1.97
ATG40Q99325 MRPL51YPR100W 423 nt2.72□□□□□ -1.97
ATG40Q99325 CNS1YBR155W 1158 nt2.72□□□□□ -1.97
ATG40Q99325 UBP12YJL197W 3765 nt2.72□□□□□ -1.97
ATG40Q99325 FLO1YAR050W 4614 nt2.72□□□□□ -1.97
ATG40Q99325 DOA4YDR069C 2781 nt2.72□□□□□ -1.97
ATG40Q99325 RPN1YHR027C 2982 nt2.71□□□□□ -1.98
ATG40Q99325 MDM38YOL027C 1722 nt2.71□□□□□ -1.98
ATG40Q99325 YKL050CYKL050C 2769 nt2.71□□□□□ -1.98
ATG40Q99325 YCL068CYCL068C 783 nt2.71□□□□□ -1.98
ATG40Q99325 YFL041W-AYFL041W-A 192 nt2.71□□□□□ -1.98
ATG40Q99325 AIM26YKL037W 357 nt2.71□□□□□ -1.98
ATG40Q99325 TIF34YMR146C 1044 nt2.71□□□□□ -1.98
ATG40Q99325 YNL013CYNL013C 378 nt2.71□□□□□ -1.98
ATG40Q99325 PRX1YBL064C 786 nt2.71□□□□□ -1.98
ATG40Q99325 PSF3YOL146W 585 nt2.71□□□□□ -1.98
ATG40Q99325 TAF3YPL011C 1062 nt2.71□□□□□ -1.98
ATG40Q99325 NIP7YPL211W 546 nt2.71□□□□□ -1.98
ATG40Q99325 RPN2YIL075C 2838 nt2.71□□□□□ -1.98
ATG40Q99325 ARP4YJL081C 1470 nt2.71□□□□□ -1.98
ATG40Q99325 KTR6YPL053C 1341 nt2.7□□□□□ -1.98
ATG40Q99325 SUP45YBR143C 1314 nt2.7□□□□□ -1.98
ATG40Q99325 POL1YNL102W 4407 nt2.7□□□□□ -1.98
ATG40Q99325 TDA1YMR291W 1761 nt2.7□□□□□ -1.98
ATG40Q99325 BUD6YLR319C 2367 nt2.7□□□□□ -1.98
ATG40Q99325 CLC1YGR167W 702 nt2.7□□□□□ -1.98
ATG40Q99325 MBR1YKL093W 1020 nt2.7□□□□□ -1.98
ATG40Q99325 SPC3YLR066W 555 nt2.7□□□□□ -1.98
ATG40Q99325 HUT1YPL244C 1020 nt2.7□□□□□ -1.98
ATG40Q99325 YDL180WYDL180W 1644 nt2.7□□□□□ -1.98
ATG40Q99325 TYR1YBR166C 1359 nt2.7□□□□□ -1.98
ATG40Q99325 ULP1YPL020C 1866 nt2.69□□□□□ -1.98
ATG40Q99325 URC2YDR520C 2319 nt2.69□□□□□ -1.98
ATG40Q99325 CHS2YBR038W 2892 nt2.69□□□□□ -1.98
ATG40Q99325 YMR317WYMR317W 3423 nt2.69□□□□□ -1.98
ATG40Q99325 VTC4YJL012C 2166 nt2.69□□□□□ -1.98
ATG40Q99325 OPI6YDL096C 327 nt2.69□□□□□ -1.98
ATG40Q99325 YDR249CYDR249C 1122 nt2.69□□□□□ -1.98
ATG40Q99325 RPB7YDR404C 516 nt2.69□□□□□ -1.98
ATG40Q99325 BUR6YER159C 429 nt2.69□□□□□ -1.98
ATG40Q99325 FMP32YFL046W 624 nt2.69□□□□□ -1.98
ATG40Q99325 RPL30YGL030W 318 nt2.69□□□□□ -1.98
ATG40Q99325 SDS3YIL084C 984 nt2.69□□□□□ -1.98
ATG40Q99325 YIL086CYIL086C 309 nt2.69□□□□□ -1.98
ATG40Q99325 EMG1YLR186W 759 nt2.69□□□□□ -1.98
ATG40Q99325 RHO5YNL180C 996 nt2.69□□□□□ -1.98
ATG40Q99325 ORC4YPR162C 1590 nt2.69□□□□□ -1.98
ATG40Q99325 VPS27YNR006W 1869 nt2.69□□□□□ -1.98
ATG40Q99325 RRN7YJL025W 1545 nt2.68□□□□□ -1.98
ATG40Q99325 ENA2YDR039C 3276 nt2.68□□□□□ -1.98
ATG40Q99325 ENA1YDR040C 3276 nt2.68□□□□□ -1.98
ATG40Q99325 SCM4YGR049W 564 nt2.68□□□□□ -1.98
ATG40Q99325 YPT35YHR105W 645 nt2.68□□□□□ -1.98
ATG40Q99325 BET1YIL004C 429 nt2.68□□□□□ -1.98
ATG40Q99325 YIL025CYIL025C 375 nt2.68□□□□□ -1.98
ATG40Q99325 YIR040CYIR040C 333 nt2.68□□□□□ -1.98
ATG40Q99325 GTT2YLL060C 702 nt2.68□□□□□ -1.98
ATG40Q99325 RUF21RUF21 707 nt2.68□□□□□ -1.98
ATG40Q99325 YOR186WYOR186W 435 nt2.68□□□□□ -1.98
ATG40Q99325 FRE4YNR060W 2160 nt2.68□□□□□ -1.98
ATG40Q99325 ERG9YHR190W 1335 nt2.68□□□□□ -1.98
ATG40Q99325 FAR1YJL157C 2493 nt2.67□□□□□ -1.98
ATG40Q99325 CDC40YDR364C 1368 nt2.67□□□□□ -1.98
ATG40Q99325 CTF18YMR078C 2226 nt2.67□□□□□ -1.98
ATG40Q99325 DOG2YHR043C 741 nt2.67□□□□□ -1.98
ATG40Q99325 FMC1YIL098C 468 nt2.67□□□□□ -1.98
ATG40Q99325 CDA2YLR308W 939 nt2.67□□□□□ -1.98
ATG40Q99325 YBL065WYBL065W 345 nt2.67□□□□□ -1.98
ATG40Q99325 LTO1YNL260C 597 nt2.67□□□□□ -1.98
ATG40Q99325 PCI8YIL071C 1335 nt2.67□□□□□ -1.98
ATG40Q99325 CUS1YMR240C 1311 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms