Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.58■■□□□ 1.04
LYSMD1Q96S90 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.57■■□□□ 1.04
LYSMD1Q96S90 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LYSMD1Q96S90 AP004607.7-201ENST00000527152 1677 ntBASIC21.56■■□□□ 1.04
LYSMD1Q96S90 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 AC009237.3-201ENST00000393279 1427 ntBASIC21.56■■□□□ 1.04
LYSMD1Q96S90 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD1Q96S90 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 AC092053.2-201ENST00000640557 1818 ntBASIC21.55■■□□□ 1.04
LYSMD1Q96S90 AL117328.2-201ENST00000624617 1940 ntBASIC21.55■■□□□ 1.04
LYSMD1Q96S90 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD1Q96S90 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.54■■□□□ 1.04
LYSMD1Q96S90 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.54■■□□□ 1.04
LYSMD1Q96S90 AC097381.1-201ENST00000429019 1296 ntBASIC21.54■■□□□ 1.04
LYSMD1Q96S90 MIR6821-201ENST00000617625 74 ntBASIC21.54■■□□□ 1.04
LYSMD1Q96S90 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD1Q96S90 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 AC026271.2-201ENST00000428091 497 ntBASIC21.53■■□□□ 1.04
LYSMD1Q96S90 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LYSMD1Q96S90 AC005224.4-201ENST00000583262 1652 ntBASIC21.53■■□□□ 1.04
LYSMD1Q96S90 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 LINC02228-203ENST00000641970 1355 ntBASIC21.52■■□□□ 1.04
LYSMD1Q96S90 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD1Q96S90 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LYSMD1Q96S90 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 RARRES2P6-201ENST00000567333 442 ntBASIC21.51■■□□□ 1.03
LYSMD1Q96S90 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.51■■□□□ 1.03
LYSMD1Q96S90 TERF1P2-201ENST00000583350 1212 ntBASIC21.51■■□□□ 1.03
LYSMD1Q96S90 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms