Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 SNX5-217ENST00000606557 1087 ntBASIC17.48■□□□□ 0.39
RAB40CQ96S21 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40CQ96S21 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40CQ96S21 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40CQ96S21 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40CQ96S21 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40CQ96S21 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40CQ96S21 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40CQ96S21 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40CQ96S21 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB40CQ96S21 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RAB40CQ96S21 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB40CQ96S21 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RAB40CQ96S21 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40CQ96S21 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40CQ96S21 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40CQ96S21 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40CQ96S21 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 AC010980.1-201ENST00000587192 1142 ntBASIC17.44■□□□□ 0.38
RAB40CQ96S21 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40CQ96S21 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 AC005703.6-201ENST00000623265 1329 ntBASIC17.44■□□□□ 0.38
RAB40CQ96S21 AL121603.2-201ENST00000557373 2117 ntBASIC17.44■□□□□ 0.38
RAB40CQ96S21 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40CQ96S21 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40CQ96S21 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB40CQ96S21 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms