Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H2AAQ96QV6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 AC131281.2-201ENST00000520478 145 ntBASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H2AAQ96QV6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 AL136116.3-201ENST00000402907 1138 ntBASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H2AAQ96QV6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H2AAQ96QV6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
HIST1H2AAQ96QV6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H2AAQ96QV6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.64■□□□□ 0.58
HIST1H2AAQ96QV6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 AC137767.1-201ENST00000602918 1920 ntBASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2AAQ96QV6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 AC139530.1-201ENST00000575312 1977 ntBASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 SERBP1P1-201ENST00000396021 1160 ntBASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 OR2I1P-207ENST00000453522 948 ntBASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H2AAQ96QV6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 AC011298.3-201ENST00000615796 283 ntBASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 AL031602.1-201ENST00000633169 911 ntBASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H2AAQ96QV6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2AAQ96QV6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2AAQ96QV6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2AAQ96QV6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms