Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RITA1Q96K30 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 AL139246.5-201ENST00000606645 996 ntBASIC17.39■□□□□ 0.37
RITA1Q96K30 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.39■□□□□ 0.37
RITA1Q96K30 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RITA1Q96K30 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
RITA1Q96K30 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RITA1Q96K30 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.38■□□□□ 0.37
RITA1Q96K30 OXCT2P1-201ENST00000447263 1535 ntBASIC17.38■□□□□ 0.37
RITA1Q96K30 AC099791.1-201ENST00000416440 715 ntBASIC17.38■□□□□ 0.37
RITA1Q96K30 AC126544.1-201ENST00000580842 1059 ntBASIC17.38■□□□□ 0.37
RITA1Q96K30 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RITA1Q96K30 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.38■□□□□ 0.37
RITA1Q96K30 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RITA1Q96K30 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RITA1Q96K30 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RITA1Q96K30 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.38■□□□□ 0.37
RITA1Q96K30 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.38■□□□□ 0.37
RITA1Q96K30 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.37■□□□□ 0.37
RITA1Q96K30 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.37■□□□□ 0.37
RITA1Q96K30 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.37■□□□□ 0.37
RITA1Q96K30 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.37■□□□□ 0.37
RITA1Q96K30 AP001330.3-201ENST00000520123 633 ntBASIC17.37■□□□□ 0.37
RITA1Q96K30 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.37■□□□□ 0.37
RITA1Q96K30 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.37■□□□□ 0.37
RITA1Q96K30 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 AL355001.2-201ENST00000620617 1191 ntBASIC17.37■□□□□ 0.37
RITA1Q96K30 AC087239.1-201ENST00000622671 572 ntBASIC17.37■□□□□ 0.37
RITA1Q96K30 AL136967.2-201ENST00000623968 743 ntBASIC17.37■□□□□ 0.37
RITA1Q96K30 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.37■□□□□ 0.37
RITA1Q96K30 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
RITA1Q96K30 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RITA1Q96K30 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.36■□□□□ 0.37
RITA1Q96K30 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.36■□□□□ 0.37
RITA1Q96K30 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.36■□□□□ 0.37
RITA1Q96K30 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.36■□□□□ 0.37
RITA1Q96K30 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RITA1Q96K30 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 EDA-201ENST00000338901 1233 ntBASIC17.36■□□□□ 0.37
RITA1Q96K30 AF213884.3-201ENST00000563833 479 ntBASIC17.36■□□□□ 0.37
RITA1Q96K30 AC133561.4-201ENST00000566112 224 ntBASIC17.36■□□□□ 0.37
RITA1Q96K30 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 OR7E47P-201ENST00000546390 1422 ntBASIC17.36■□□□□ 0.37
RITA1Q96K30 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RITA1Q96K30 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RITA1Q96K30 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RITA1Q96K30 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.36■□□□□ 0.37
RITA1Q96K30 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.35■□□□□ 0.37
RITA1Q96K30 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.35■□□□□ 0.37
RITA1Q96K30 SUDS3P1-201ENST00000505831 966 ntBASIC17.35■□□□□ 0.37
RITA1Q96K30 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.35■□□□□ 0.37
RITA1Q96K30 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.35■□□□□ 0.37
RITA1Q96K30 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RITA1Q96K30 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RITA1Q96K30 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 FBXW4P1-201ENST00000426721 2239 ntBASIC17.35■□□□□ 0.37
RITA1Q96K30 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.35■□□□□ 0.37
RITA1Q96K30 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RITA1Q96K30 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RITA1Q96K30 MIR939-201ENST00000401314 82 ntBASIC17.34■□□□□ 0.37
RITA1Q96K30 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
RITA1Q96K30 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.34■□□□□ 0.37
RITA1Q96K30 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.34■□□□□ 0.37
RITA1Q96K30 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms