Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SIPA1Q96FS4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 CROCCP5-201ENST00000436658 830 ntBASIC21.71■■□□□ 1.07
SIPA1Q96FS4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIPA1Q96FS4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SIPA1Q96FS4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SIPA1Q96FS4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SIPA1Q96FS4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIPA1Q96FS4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.69■■□□□ 1.06
SIPA1Q96FS4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.69■■□□□ 1.06
SIPA1Q96FS4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIPA1Q96FS4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 AC055733.4-201ENST00000638462 1354 ntBASIC21.67■■□□□ 1.06
SIPA1Q96FS4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIPA1Q96FS4 MFSD11-216ENST00000590393 1141 ntBASIC21.67■■□□□ 1.06
SIPA1Q96FS4 AC104771.1-201ENST00000603335 964 ntBASIC21.67■■□□□ 1.06
SIPA1Q96FS4 DUSP8P5-201ENST00000422884 1815 ntBASIC21.66■■□□□ 1.06
SIPA1Q96FS4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 AL109923.1-201ENST00000618799 583 ntBASIC21.66■■□□□ 1.06
SIPA1Q96FS4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIPA1Q96FS4 AP004607.7-201ENST00000527152 1677 ntBASIC21.66■■□□□ 1.06
SIPA1Q96FS4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 MIR663A-201ENST00000385250 93 ntBASIC21.65■■□□□ 1.06
SIPA1Q96FS4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 AP001160.3-201ENST00000601484 763 ntBASIC21.65■■□□□ 1.06
SIPA1Q96FS4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms