Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 AC105036.2-201ENST00000569468 176 ntBASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNRNP40Q96DI7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 CNN2P6-201ENST00000439038 900 ntBASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNRNP40Q96DI7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 AC073210.2-201ENST00000430369 194 ntBASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 AC133552.2-202ENST00000575694 574 ntBASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SNRNP40Q96DI7 AL139125.2-201ENST00000623134 1869 ntBASIC19.52■□□□□ 0.71
SNRNP40Q96DI7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRNP40Q96DI7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 AC055733.4-201ENST00000638462 1354 ntBASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.5■□□□□ 0.71
SNRNP40Q96DI7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 AC098934.4-201ENST00000564127 592 ntBASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 AC010536.3-201ENST00000620306 533 ntBASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNRNP40Q96DI7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 ABCB10P4-201ENST00000566803 2184 ntBASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
SNRNP40Q96DI7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms