Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB39BQ96DA2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB39BQ96DA2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RAB39BQ96DA2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB39BQ96DA2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 C1orf229-201ENST00000623686 2258 ntBASIC18.43■□□□□ 0.54
RAB39BQ96DA2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.43■□□□□ 0.54
RAB39BQ96DA2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB39BQ96DA2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 MIR572-201ENST00000384983 95 ntBASIC18.42■□□□□ 0.54
RAB39BQ96DA2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 AP005435.1-201ENST00000529293 1178 ntBASIC18.42■□□□□ 0.54
RAB39BQ96DA2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB39BQ96DA2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 AL354811.1-201ENST00000610286 706 ntBASIC18.41■□□□□ 0.54
RAB39BQ96DA2 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB39BQ96DA2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 AC079630.1-202ENST00000618127 1840 ntBASIC18.4■□□□□ 0.54
RAB39BQ96DA2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 AC087623.3-201ENST00000607047 1098 ntBASIC18.4■□□□□ 0.54
RAB39BQ96DA2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB39BQ96DA2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB39BQ96DA2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB39BQ96DA2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.39■□□□□ 0.54
RAB39BQ96DA2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 SLC25A24-204ENST00000569674 2357 ntBASIC18.39■□□□□ 0.53
RAB39BQ96DA2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 YBX1P1-201ENST00000445822 960 ntBASIC18.39■□□□□ 0.53
RAB39BQ96DA2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 AC010525.1-201ENST00000585559 441 ntBASIC18.39■□□□□ 0.53
RAB39BQ96DA2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 AC092666.2-201ENST00000613287 246 ntBASIC18.39■□□□□ 0.53
RAB39BQ96DA2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB39BQ96DA2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 DUSP8P3-201ENST00000399571 1760 ntBASIC18.38■□□□□ 0.53
RAB39BQ96DA2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 AC012414.1-201ENST00000556676 535 ntBASIC18.38■□□□□ 0.53
RAB39BQ96DA2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms