Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTP4A1Q93096 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTP4A1Q93096 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTP4A1Q93096 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.39■□□□□ 0.69
PTP4A1Q93096 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.38■□□□□ 0.69
PTP4A1Q93096 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A1Q93096 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A1Q93096 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A1Q93096 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.38■□□□□ 0.69
PTP4A1Q93096 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A1Q93096 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.38■□□□□ 0.69
PTP4A1Q93096 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A1Q93096 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTP4A1Q93096 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTP4A1Q93096 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.37■□□□□ 0.69
PTP4A1Q93096 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTP4A1Q93096 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PTP4A1Q93096 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.37■□□□□ 0.69
PTP4A1Q93096 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 AL031602.1-201ENST00000633169 911 ntBASIC19.37■□□□□ 0.69
PTP4A1Q93096 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTP4A1Q93096 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.37■□□□□ 0.69
PTP4A1Q93096 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.37■□□□□ 0.69
PTP4A1Q93096 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTP4A1Q93096 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 MIR3621-201ENST00000580529 85 ntBASIC19.36■□□□□ 0.69
PTP4A1Q93096 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.36■□□□□ 0.69
PTP4A1Q93096 AL117332.1-201ENST00000622628 974 ntBASIC19.36■□□□□ 0.69
PTP4A1Q93096 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTP4A1Q93096 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.36■□□□□ 0.69
PTP4A1Q93096 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.35■□□□□ 0.69
PTP4A1Q93096 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PTP4A1Q93096 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTP4A1Q93096 Z98882.1-201ENST00000622160 2253 ntBASIC19.35■□□□□ 0.69
PTP4A1Q93096 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
PTP4A1Q93096 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.34■□□□□ 0.69
PTP4A1Q93096 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.34■□□□□ 0.69
PTP4A1Q93096 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTP4A1Q93096 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PTP4A1Q93096 AC241377.3-202ENST00000626088 1088 ntBASIC19.34■□□□□ 0.69
PTP4A1Q93096 AC241585.3-202ENST00000628937 1088 ntBASIC19.34■□□□□ 0.69
PTP4A1Q93096 AC245100.8-202ENST00000629247 1058 ntBASIC19.34■□□□□ 0.69
PTP4A1Q93096 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTP4A1Q93096 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.33■□□□□ 0.69
PTP4A1Q93096 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTP4A1Q93096 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PTP4A1Q93096 AC079089.2-201ENST00000531211 1277 ntBASIC19.33■□□□□ 0.68
PTP4A1Q93096 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A1Q93096 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
PTP4A1Q93096 AC026471.6-201ENST00000622954 1905 ntBASIC19.33■□□□□ 0.68
PTP4A1Q93096 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.33■□□□□ 0.68
PTP4A1Q93096 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTP4A1Q93096 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.32■□□□□ 0.68
PTP4A1Q93096 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms