Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.3■■□□□ 1
USP7Q93009 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP7Q93009 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
USP7Q93009 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
USP7Q93009 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.29■■□□□ 1
USP7Q93009 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.29■■□□□ 1
USP7Q93009 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.29■■□□□ 1
USP7Q93009 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
USP7Q93009 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 AC123595.1-201ENST00000440769 1046 ntBASIC21.29■■□□□ 1
USP7Q93009 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.29■■□□□ 1
USP7Q93009 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.29■■□□□ 1
USP7Q93009 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP7Q93009 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.28■■□□□ 1
USP7Q93009 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
USP7Q93009 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.28■■□□□ 1
USP7Q93009 LINC00565-201ENST00000562710 2331 ntBASIC21.28■■□□□ 1
USP7Q93009 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.28■■□□□ 1
USP7Q93009 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
USP7Q93009 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
USP7Q93009 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.28■■□□□ 1
USP7Q93009 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
USP7Q93009 AC012414.1-201ENST00000556676 535 ntBASIC21.28■■□□□ 1
USP7Q93009 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.28■■□□□ 1
USP7Q93009 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.28■■□□□ 1
USP7Q93009 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.28■■□□□ 1
USP7Q93009 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 AC139530.1-201ENST00000575312 1977 ntBASIC21.28■■□□□ 1
USP7Q93009 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.28■■□□□ 1
USP7Q93009 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP7Q93009 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.27■■□□□ 1
USP7Q93009 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
USP7Q93009 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.27■■□□□ 1
USP7Q93009 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.27■■□□□ 1
USP7Q93009 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.27■■□□□ 1
USP7Q93009 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.27■■□□□ 1
USP7Q93009 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.27■■□□□ 1
USP7Q93009 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP7Q93009 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
USP7Q93009 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP7Q93009 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP7Q93009 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.26■□□□□ 0.99
USP7Q93009 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP7Q93009 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.26■□□□□ 0.99
USP7Q93009 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USP7Q93009 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.26■□□□□ 0.99
USP7Q93009 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP7Q93009 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP7Q93009 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP7Q93009 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.26■□□□□ 0.99
USP7Q93009 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
USP7Q93009 AC010525.1-201ENST00000585559 441 ntBASIC21.26■□□□□ 0.99
USP7Q93009 AL354811.1-201ENST00000610286 706 ntBASIC21.26■□□□□ 0.99
USP7Q93009 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP7Q93009 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.26■□□□□ 0.99
USP7Q93009 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.25■□□□□ 0.99
USP7Q93009 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.25■□□□□ 0.99
USP7Q93009 AC080038.3-201ENST00000623346 1952 ntBASIC21.25■□□□□ 0.99
USP7Q93009 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.25■□□□□ 0.99
USP7Q93009 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP7Q93009 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.25■□□□□ 0.99
USP7Q93009 AL499627.2-201ENST00000606283 725 ntBASIC21.25■□□□□ 0.99
USP7Q93009 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.25■□□□□ 0.99
USP7Q93009 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP7Q93009 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms