Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 CD99P1-205ENST00000527459 561 ntBASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 AC079089.2-201ENST00000531211 1277 ntBASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 AC092068.2-201ENST00000590491 1708 ntBASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
RAPGEF4Q8WZA2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 SLC7A5P2-201ENST00000553010 536 ntBASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RAPGEF4Q8WZA2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 GUSBP6-202ENST00000438529 1198 ntBASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 LINC01960-201ENST00000563759 1884 ntBASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RAPGEF4Q8WZA2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF4Q8WZA2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF4Q8WZA2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
RAPGEF4Q8WZA2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF4Q8WZA2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF4Q8WZA2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.51■■■□□ 2.15
RAPGEF4Q8WZA2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.51■■■□□ 2.15
RAPGEF4Q8WZA2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 TMEM191A-211ENST00000637163 1067 ntBASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF4Q8WZA2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 AP004607.7-201ENST00000527152 1677 ntBASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 AC010141.2-201ENST00000452426 721 ntBASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF4Q8WZA2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 SLC29A4P1-201ENST00000398760 971 ntBASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 AL138781.1-201ENST00000566567 1274 ntBASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 AC138907.5-202ENST00000569484 235 ntBASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF4Q8WZA2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 CNN2P6-201ENST00000439038 900 ntBASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF4Q8WZA2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.46■■■□□ 2.15
RAPGEF4Q8WZA2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.46■■■□□ 2.15
RAPGEF4Q8WZA2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms