Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNIP1Q8TAD8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 AC010536.3-201ENST00000620306 533 ntBASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.43■□□□□ 0.86
SNIP1Q8TAD8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNIP1Q8TAD8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 AC098590.1-201ENST00000468126 897 ntBASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.41■□□□□ 0.86
SNIP1Q8TAD8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 KRT18P20-201ENST00000548986 1279 ntBASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 SLC7A5P1-201ENST00000568957 537 ntBASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNIP1Q8TAD8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNIP1Q8TAD8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNIP1Q8TAD8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SNIP1Q8TAD8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.39■□□□□ 0.86
SNIP1Q8TAD8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 MIPEPP3-201ENST00000412105 444 ntBASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SNIP1Q8TAD8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 DUSP5P2-201ENST00000426873 1033 ntBASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 GCSHP5-201ENST00000443090 522 ntBASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 AC013268.1-206ENST00000638368 961 ntBASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 AC112229.1-201ENST00000639295 961 ntBASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNIP1Q8TAD8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 AC022211.4-201ENST00000625094 2161 ntBASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms