Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC079089.2-201ENST00000531211 1277 ntBASIC16.93■□□□□ 0.3
LINC01006Q8NI28 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 AC005181.1-201ENST00000604782 1256 ntBASIC16.93■□□□□ 0.3
LINC01006Q8NI28 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 MYCNOS-205ENST00000641950 531 ntBASIC16.93■□□□□ 0.3
LINC01006Q8NI28 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC01006Q8NI28 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 DUSP8P5-201ENST00000422884 1815 ntBASIC16.92■□□□□ 0.3
LINC01006Q8NI28 TSPY6P-201ENST00000448518 926 ntBASIC16.92■□□□□ 0.3
LINC01006Q8NI28 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 AC142086.2-201ENST00000569753 217 ntBASIC16.92■□□□□ 0.3
LINC01006Q8NI28 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 LINC01960-201ENST00000563759 1884 ntBASIC16.92■□□□□ 0.3
LINC01006Q8NI28 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LINC01006Q8NI28 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01006Q8NI28 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 CD99P1-205ENST00000527459 561 ntBASIC16.9■□□□□ 0.3
LINC01006Q8NI28 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC01006Q8NI28 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.89■□□□□ 0.3
LINC01006Q8NI28 AP004607.7-201ENST00000527152 1677 ntBASIC16.89■□□□□ 0.29
LINC01006Q8NI28 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01006Q8NI28 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 SLC7A5P2-201ENST00000553010 536 ntBASIC16.88■□□□□ 0.29
LINC01006Q8NI28 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01006Q8NI28 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 SLC29A4P1-201ENST00000398760 971 ntBASIC16.87■□□□□ 0.29
LINC01006Q8NI28 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 GUSBP6-202ENST00000438529 1198 ntBASIC16.87■□□□□ 0.29
LINC01006Q8NI28 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 KRT18P20-201ENST00000548986 1279 ntBASIC16.87■□□□□ 0.29
LINC01006Q8NI28 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 AC138907.5-202ENST00000569484 235 ntBASIC16.87■□□□□ 0.29
LINC01006Q8NI28 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms