Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDND2Q8NHS1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 AC127496.7-201ENST00000625110 1798 ntBASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 LINC02228-203ENST00000641970 1355 ntBASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 AC022517.1-201ENST00000592429 346 ntBASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDND2Q8NHS1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 KRT18P14-201ENST00000534205 1250 ntBASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLDND2Q8NHS1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 TERF1P2-201ENST00000583350 1212 ntBASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDND2Q8NHS1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 AC068587.7-201ENST00000641602 218 ntBASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDND2Q8NHS1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDND2Q8NHS1 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms