Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 AC142086.6-201ENST00000621154 1765 ntBASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 MIPEPP3-201ENST00000412105 444 ntBASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 AC091874.3-201ENST00000512672 1195 ntBASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 AL445228.2-201ENST00000605589 952 ntBASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC168Q8NDH2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC168Q8NDH2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC168Q8NDH2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC168Q8NDH2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC168Q8NDH2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC168Q8NDH2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC168Q8NDH2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC168Q8NDH2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 OR10C1-204ENST00000622521 1039 ntBASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC168Q8NDH2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 UBE2SP1-201ENST00000450587 669 ntBASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 AC055733.4-201ENST00000638462 1354 ntBASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 AP003097.1-201ENST00000530657 1135 ntBASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC168Q8NDH2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 AC010141.2-201ENST00000452426 721 ntBASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 AC007322.4-201ENST00000509611 723 ntBASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC168Q8NDH2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 AC009237.3-201ENST00000393279 1427 ntBASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC168Q8NDH2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 AL512625.2-201ENST00000417533 625 ntBASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC168Q8NDH2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms