Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.79■□□□□ 0.76
LSMEM1Q8N8F7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSMEM1Q8N8F7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 AC087239.1-201ENST00000622671 572 ntBASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSMEM1Q8N8F7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LSMEM1Q8N8F7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.77■□□□□ 0.75
LSMEM1Q8N8F7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.76■□□□□ 0.75
LSMEM1Q8N8F7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 AC010141.3-201ENST00000456659 717 ntBASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 AC010525.1-201ENST00000585559 441 ntBASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 FBXW4P1-201ENST00000426721 2239 ntBASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSMEM1Q8N8F7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 FAM99A-202ENST00000538190 1989 ntBASIC19.74■□□□□ 0.75
LSMEM1Q8N8F7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 AC010542.4-201ENST00000563151 1910 ntBASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 OR7E47P-201ENST00000546390 1422 ntBASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LSMEM1Q8N8F7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms