Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 AC007322.1-201ENST00000426983 750 ntBASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 AC083906.2-201ENST00000511578 360 ntBASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL27A1Q8IZC6 CYP2T1P-201ENST00000432607 1285 ntBASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 TSPY20P-201ENST00000450910 630 ntBASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 KRT18P20-201ENST00000548986 1279 ntBASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL27A1Q8IZC6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 AF201337.1-201ENST00000520239 748 ntBASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 TMEM191A-211ENST00000637163 1067 ntBASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL27A1Q8IZC6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL27A1Q8IZC6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.62■□□□□ 0.89
COL27A1Q8IZC6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 AC073210.2-201ENST00000430369 194 ntBASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 AC010536.3-201ENST00000620306 533 ntBASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.61■□□□□ 0.89
COL27A1Q8IZC6 EEF1DP3-203ENST00000566025 782 ntBASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 AC133552.2-202ENST00000575694 574 ntBASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 AP001160.3-201ENST00000601484 763 ntBASIC20.6■□□□□ 0.89
COL27A1Q8IZC6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL27A1Q8IZC6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL27A1Q8IZC6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL27A1Q8IZC6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL27A1Q8IZC6 AC079089.2-201ENST00000531211 1277 ntBASIC20.58■□□□□ 0.88
COL27A1Q8IZC6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.58■□□□□ 0.88
COL27A1Q8IZC6 AC013268.1-206ENST00000638368 961 ntBASIC20.58■□□□□ 0.88
COL27A1Q8IZC6 AC112229.1-201ENST00000639295 961 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms