Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 CCDC92B-201ENST00000575506 885 ntBASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 SMUG1P1-201ENST00000590640 811 ntBASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 AC092666.2-201ENST00000613287 246 ntBASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM48Q8IWZ4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 BX005040.4-201ENST00000637145 1518 ntBASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM48Q8IWZ4 DUSP8P5-201ENST00000422884 1815 ntBASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 KRT18P14-201ENST00000534205 1250 ntBASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TRIM48Q8IWZ4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L2-201ENST00000561772 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L6-201ENST00000626483 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L1-201ENST00000627662 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L8-201ENST00000629013 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L3-201ENST00000630187 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L7-201ENST00000630678 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 DUX4L5-201ENST00000630834 1275 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 AC079834.2-201ENST00000609776 1949 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 AC068473.5-201ENST00000616428 2072 ntBASIC21.13■□□□□ 0.97
TRIM48Q8IWZ4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM48Q8IWZ4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 TERF1P2-201ENST00000583350 1212 ntBASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM48Q8IWZ4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 AC079089.2-201ENST00000531211 1277 ntBASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM48Q8IWZ4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM48Q8IWZ4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms