Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 FAM99A-202ENST00000538190 1989 ntBASIC20.2■□□□□ 0.82
CCDC71Q8IV32 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC71Q8IV32 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 AC010542.4-201ENST00000563151 1910 ntBASIC20.19■□□□□ 0.82
CCDC71Q8IV32 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 RASA4CP-201ENST00000424092 1398 ntBASIC20.19■□□□□ 0.82
CCDC71Q8IV32 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC71Q8IV32 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 AC027682.1-201ENST00000562846 899 ntBASIC20.18■□□□□ 0.82
CCDC71Q8IV32 AC104564.3-201ENST00000582367 638 ntBASIC20.18■□□□□ 0.82
CCDC71Q8IV32 AC011298.3-201ENST00000615796 283 ntBASIC20.18■□□□□ 0.82
CCDC71Q8IV32 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC71Q8IV32 C17orf82-201ENST00000623772 1530 ntBASIC20.17■□□□□ 0.82
CCDC71Q8IV32 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC71Q8IV32 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 AC006455.2-201ENST00000429931 906 ntBASIC20.16■□□□□ 0.82
CCDC71Q8IV32 AL138724.1-201ENST00000606771 1088 ntBASIC20.16■□□□□ 0.82
CCDC71Q8IV32 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC71Q8IV32 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 AC099791.1-201ENST00000416440 715 ntBASIC20.15■□□□□ 0.82
CCDC71Q8IV32 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.15■□□□□ 0.82
CCDC71Q8IV32 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC71Q8IV32 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 AC005229.4-201ENST00000610085 2198 ntBASIC20.14■□□□□ 0.81
CCDC71Q8IV32 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC71Q8IV32 AC241377.3-202ENST00000626088 1088 ntBASIC20.14■□□□□ 0.81
CCDC71Q8IV32 AC241585.3-202ENST00000628937 1088 ntBASIC20.14■□□□□ 0.81
CCDC71Q8IV32 AC245100.8-202ENST00000629247 1058 ntBASIC20.14■□□□□ 0.81
CCDC71Q8IV32 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms