Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB43Q86YS6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB43Q86YS6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 RARRES2P11-201ENST00000635158 484 ntBASIC20.53■□□□□ 0.88
RAB43Q86YS6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB43Q86YS6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB43Q86YS6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB43Q86YS6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB43Q86YS6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB43Q86YS6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB43Q86YS6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
RAB43Q86YS6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB43Q86YS6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.52■□□□□ 0.88
RAB43Q86YS6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB43Q86YS6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAB43Q86YS6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB43Q86YS6 AC004812.2-201ENST00000611079 2094 ntBASIC20.52■□□□□ 0.87
RAB43Q86YS6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAB43Q86YS6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 AL353803.4-201ENST00000565882 1934 ntBASIC20.51■□□□□ 0.87
RAB43Q86YS6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 EP400NL-214ENST00000641289 2402 ntBASIC20.51■□□□□ 0.87
RAB43Q86YS6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 AC090192.1-201ENST00000517740 490 ntBASIC20.51■□□□□ 0.87
RAB43Q86YS6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB43Q86YS6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAB43Q86YS6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.5■□□□□ 0.87
RAB43Q86YS6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 AC010141.3-201ENST00000456659 717 ntBASIC20.5■□□□□ 0.87
RAB43Q86YS6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.5■□□□□ 0.87
RAB43Q86YS6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.5■□□□□ 0.87
RAB43Q86YS6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB43Q86YS6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.5■□□□□ 0.87
RAB43Q86YS6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB43Q86YS6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB43Q86YS6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms